6OFP
Structure of the C-terminal cargo binding domain of human Bicaudal D2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CHESS BEAMLINE F1 |
Synchrotron site | CHESS |
Beamline | F1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-04-17 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.98 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 73.694, 36.958, 78.706 |
Unit cell angles | 90.00, 107.41, 90.00 |
Refinement procedure
Resolution | 37.551 - 2.006 |
R-factor | 0.2288 |
Rwork | 0.226 |
R-free | 0.25670 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ytd |
RMSD bond length | 0.003 |
RMSD bond angle | 0.667 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX (dev_1819) |
Refinement software | PHENIX (dev_1819) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 2.020 |
High resolution limit [Å] | 2.000 | 2.000 |
Number of reflections | 13628 | 542 |
<I/σ(I)> | 14.9 | 2 |
Completeness [%] | 98.0 | 85 |
Redundancy | 3.3 | 2.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.05 | 293 | 0.1 M Tris, pH 8.05, 26% tert-Butanol, 40 mM CaCl2, 60 mM 1,6-Hexanediol |