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6O8M

Crystal Structure of C9S apo Sulfide-responsive transcriptional repressor (SqrR) from Rhodobacter capsulated bound to diamide (tetramethylazodicarboxamide).

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 4.2.2
Synchrotron siteALS
Beamline4.2.2
Temperature [K]100
Detector technologyCMOS
Collection date2017-07-07
DetectorRDI CMOS_8M
Wavelength(s)1.000031
Spacegroup nameP 61 2 2
Unit cell lengths46.509, 46.509, 158.468
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution40.278 - 1.460
R-factor0.1462
Rwork0.145
R-free0.17750
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3pqk
RMSD bond length0.008
RMSD bond angle0.998
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]52.8201.550
High resolution limit [Å]1.4601.460
Rmerge0.944
Rmeas0.0510.984
Rpim0.0120.273
Number of reflections179982546
<I/σ(I)>33.92.4
Completeness [%]99.9100
Redundancy18.412.5
CC(1/2)1.0000.875
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293Crystallization buffer : sodium citrate 1.8 M pH=6.4, Protein buffer: 20 mM Tris pH=8, 200 mM NaCl, 2mM EDTA, SqrR 6 mg/ml

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