6O29
Crystal structure of 4493 Fab in complex with circumsporozoite protein NPDP and anti-kappa VHH domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-11-26 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.033167 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 54.537, 79.761, 281.795 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.589 - 2.400 |
R-factor | 0.2024 |
Rwork | 0.201 |
R-free | 0.23960 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | In house model |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.440 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.151 | 0.830 |
Rpim | 0.043 | 0.230 |
Number of reflections | 49310 | 2353 |
<I/σ(I)> | 12 | 1.5 |
Completeness [%] | 99.9 | 100 |
Redundancy | 14 | 14 |
CC(1/2) | 0.997 | 0.761 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 20 % (w/v) PEG3350, 0.2 M sodium nitrate |