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6NXV

Crystal structure of the theta class glutathione S-transferase from the citrus canker pathogen Xanthomonas axonopodis pv. citri, apo form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2018-06-09
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.5418
Spacegroup nameP 21 21 21
Unit cell lengths87.159, 105.500, 124.320
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.813 - 2.750
R-factor0.196
Rwork0.194
R-free0.24130
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6nv6
Data reduction softwareiMOSFLM (7.2.2)
Data scaling softwareSCALA (3.3.22)
Phasing softwarePHASER (2.8.2)
Refinement softwarePHENIX (1.14-3260)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]80.43930.0002.900
High resolution limit [Å]2.7502.9002.750
Rmerge0.1210.686
Rmeas0.1480.1480.842
Rpim0.0630.0630.356
Total number of observations159325
Number of reflections30033300334282
<I/σ(I)>8.98.92
Completeness [%]98.898.697.1
Redundancy5.35.35.4
CC(1/2)0.9940.752
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.12730.1M Bis-Tris, pH 7.1, 0.2M magnesium chloride, 26% PEG 3,350. Crystals appear in 2-3 days and grow up to 6-7 days

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PDB entries from 2024-05-15

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