6NXV
Crystal structure of the theta class glutathione S-transferase from the citrus canker pathogen Xanthomonas axonopodis pv. citri, apo form
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU MICROMAX-007 HF |
| Temperature [K] | 100 |
| Detector technology | IMAGE PLATE |
| Collection date | 2018-06-09 |
| Detector | RIGAKU RAXIS IV++ |
| Wavelength(s) | 1.5418 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 87.159, 105.500, 124.320 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 29.813 - 2.750 |
| R-factor | 0.196 |
| Rwork | 0.194 |
| R-free | 0.24130 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 6nv6 |
| Data reduction software | iMOSFLM (7.2.2) |
| Data scaling software | SCALA (3.3.22) |
| Phasing software | PHASER (2.8.2) |
| Refinement software | PHENIX (1.14-3260) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 80.439 | 30.000 | 2.900 |
| High resolution limit [Å] | 2.750 | 2.900 | 2.750 |
| Rmerge | 0.121 | 0.686 | |
| Rmeas | 0.148 | 0.148 | 0.842 |
| Rpim | 0.063 | 0.063 | 0.356 |
| Total number of observations | 159325 | ||
| Number of reflections | 30033 | 30033 | 4282 |
| <I/σ(I)> | 8.9 | 8.9 | 2 |
| Completeness [%] | 98.8 | 98.6 | 97.1 |
| Redundancy | 5.3 | 5.3 | 5.4 |
| CC(1/2) | 0.994 | 0.752 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7.1 | 273 | 0.1M Bis-Tris, pH 7.1, 0.2M magnesium chloride, 26% PEG 3,350. Crystals appear in 2-3 days and grow up to 6-7 days |






