6NV6
Crystal structure of the theta class glutathione S-transferase from the citrus canker pathogen Xanthomonas axonopodis pv. citri with glutathione bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2018-09-02 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 89.120, 106.510, 125.230 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.998 - 2.650 |
R-factor | 0.1798 |
Rwork | 0.177 |
R-free | 0.22590 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4kh7 |
Data reduction software | iMOSFLM (7.2.2) |
Data scaling software | SCALA (3.3.22) |
Phasing software | PHASER (2.8.2) |
Refinement software | PHENIX (1.14-3260) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.790 |
High resolution limit [Å] | 2.650 | 2.650 |
Rmerge | 0.109 | 0.639 |
Rmeas | 0.138 | 0.812 |
Rpim | 0.063 | 0.496 |
Number of reflections | 35328 | 5096 |
<I/σ(I)> | 10.7 | 2 |
Completeness [%] | 99.8 | 99.1 |
Redundancy | 4.8 | 4.7 |
CC(1/2) | 0.993 | 0.632 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.25 | 293 | 0.1M bis-tris:HCl, pH 7.0, 0.2M magnesium chloride and 25% (w/v) PEG 3,350 |