6NR1
The X-ray crystal structure of Streptococcus pneumoniae Fatty Acid Kinase (Fak) B2 protein loaded with Vaccenic acid (C18:1 delta11) to 2.1 Angstrom resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-BM |
Synchrotron site | APS |
Beamline | 22-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-06-28 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 59.655, 103.409, 107.925 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 52.210 - 2.100 |
R-factor | 0.1871 |
Rwork | 0.184 |
R-free | 0.24120 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6dj6 |
RMSD bond length | 0.009 |
RMSD bond angle | 0.915 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX ((dev_3354: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 74.670 | 2.160 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.101 | 0.616 |
Rmeas | 0.113 | 0.693 |
Rpim | 0.050 | 0.311 |
Number of reflections | 39625 | 3194 |
<I/σ(I)> | 9 | 2 |
Completeness [%] | 99.7 | 99.7 |
Redundancy | 4.8 | 4.8 |
CC(1/2) | 0.998 | 0.799 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 290 | 18% w/v PEG3350, 4.8% v/v 2-Propanol, 0.1M CAPSO pH 9.0, 17% v/v PEG400 (LMB D12) |