6NOW
Human Mitochondrial Alanyl-tRNA Synthetase C-Ala domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-01-24 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97938 |
Spacegroup name | I 41 |
Unit cell lengths | 104.420, 104.420, 164.270 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.890 - 4.099 |
R-factor | 0.2358 |
Rwork | 0.233 |
R-free | 0.28200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6nly |
RMSD bond length | 0.003 |
RMSD bond angle | 0.653 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER (2.7.17) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 35.890 | 35.890 | 4.210 |
High resolution limit [Å] | 4.100 | 18.330 | 4.100 |
Rmerge | 0.055 | 0.040 | 0.684 |
Rmeas | 0.059 | 0.044 | 0.738 |
Total number of observations | 52247 | ||
Number of reflections | 6904 | 67 | 504 |
<I/σ(I)> | 17.45 | 42.79 | 2.74 |
Completeness [%] | 99.7 | 85.9 | 99.6 |
Redundancy | 7.568 | 5.164 | 7.028 |
CC(1/2) | 0.999 | 0.998 | 0.873 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 7 | 298 | 0.1 M imidazole, 2 M sodium chloride |