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6NOE

Crystal Structure of the All-Trans Retinal-Bound R111K:Y134F:T54V:R132Q:P39Y:R59Y:L121E:I63D Mutant of Human Cellular Retinoic Acid Binding Protein II in the Dark at 1.97 Angstrom Resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-G
Synchrotron siteAPS
Beamline21-ID-G
Temperature [K]100
Detector technologyCCD
Collection date2018-03-03
DetectorRAYONIX MX300HE
Wavelength(s)0.97856
Spacegroup nameP 31 2 1
Unit cell lengths59.170, 59.170, 99.733
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution35.738 - 1.969
R-factor0.2099
Rwork0.205
R-free0.25490
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4yfp
RMSD bond length0.007
RMSD bond angle0.911
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX ((1.11.1_2575))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]35.7402.040
High resolution limit [Å]1.9691.969
Rmerge0.114
Number of reflections138371398
<I/σ(I)>252.4
Completeness [%]93.194.9
Redundancy7.36
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP277PEG 3350,Sodium Malonate

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