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6NKX

Ternary complex crystal structure of K289M variant of DNA polymerase Beta with "hot-spot sequence" with dGTP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007
Temperature [K]100
Detector technologyPIXEL
Collection date2018-06-18
DetectorDECTRIS PILATUS3 R 200K-A
Wavelength(s)1.5418
Spacegroup nameP 1 21 1
Unit cell lengths50.516, 79.884, 55.200
Unit cell angles90.00, 107.99, 90.00
Refinement procedure
Resolution26.250 - 1.980
R-factor0.1842
Rwork0.181
R-free0.23200
RMSD bond length0.008
RMSD bond angle0.945
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.010
High resolution limit [Å]1.9805.3701.980
Rmerge0.0670.0410.503
Rmeas0.0800.0500.673
Rpim0.0440.0280.441
Total number of observations84760
Number of reflections280791496966
<I/σ(I)>11.5
Completeness [%]96.499.165.9
Redundancy33.11.6
CC(1/2)0.9970.711
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29116-18% PEG 3350

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