6NKJ
1.3 Angstrom Resolution Crystal Structure of UDP-N-acetylglucosamine 1-carboxyvinyltransferase from Streptococcus pneumoniae in Complex with (2R)-2-(phosphonooxy)propanoic acid.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 21-ID-G |
| Synchrotron site | APS |
| Beamline | 21-ID-G |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2017-07-12 |
| Detector | MARMOSAIC 300 mm CCD |
| Wavelength(s) | 0.97856 |
| Spacegroup name | P 32 |
| Unit cell lengths | 120.713, 120.713, 70.614 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 27.770 - 1.300 |
| R-factor | 0.14528 |
| Rwork | 0.145 |
| R-free | 0.15494 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3sg1 |
| RMSD bond length | 0.007 |
| RMSD bond angle | 1.595 |
| Data reduction software | HKL-3000 |
| Data scaling software | HKL-3000 |
| Phasing software | MoRDa |
| Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 30.000 | 1.320 |
| High resolution limit [Å] | 1.300 | 1.300 |
| Rmerge | 0.049 | 0.599 |
| Rmeas | 0.057 | 0.712 |
| Rpim | 0.029 | 0.378 |
| Number of reflections | 285243 | 14279 |
| <I/σ(I)> | 22.2 | 2.3 |
| Completeness [%] | 99.8 | 100 |
| Redundancy | 3.5 | 3.3 |
| CC(1/2) | 0.725 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7 | 292 | Protein: 11.0 mg/ml, 0.5M Sodium chloride, 0.01M Tris HCl (pH 8.3); Screen: Classics II (B9), 1.8M Ammonium citrate pH=7.0; Cryo: 1.8M Ammonium citrate pH=7.0, 25% Sucrose. |






