Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6NKE

Wild-type GGGPS from Thermoplasma volcanium

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL12-2
Synchrotron siteSSRL
BeamlineBL12-2
Temperature [K]298
Detector technologyPIXEL
Collection date2017-12-10
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.987
Spacegroup nameP 41 21 2
Unit cell lengths73.761, 73.761, 122.600
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution36.880 - 1.720
R-factor0.197
Rwork0.197
R-free0.20410
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4jej
RMSD bond length0.003
RMSD bond angle0.637
Data reduction softwareiMOSFLM
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]73.7601.750
High resolution limit [Å]1.7201.720
Rmerge0.071
Rmeas0.075
Rpim0.0230.443
Number of reflections367321916
<I/σ(I)>15.21.4
Completeness [%]100.0100
Redundancy9.79.9
CC(1/2)0.9980.791
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.04294.152.2M Ammonium Sulfate, 0.1M Tris pH 8.04

245663

PDB entries from 2025-12-03

PDB statisticsPDBj update infoContact PDBjnumon