6NF3
Structure of the Monoclinic-3 (Monocln-3) Crystal Form of Human Apolipoprotein C1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-D |
Temperature [K] | 298 |
Detector technology | AREA DETECTOR |
Collection date | 1992-07-15 |
Detector | SDMS |
Wavelength(s) | 1.54 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 38.169, 49.965, 35.423 |
Unit cell angles | 90.00, 105.10, 90.00 |
Refinement procedure
Resolution | 18.970 - 2.330 |
R-factor | 0.20485 |
Rwork | 0.199 |
R-free | 0.31839 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1rop |
RMSD bond length | 0.007 |
RMSD bond angle | 1.093 |
Data reduction software | DENZO |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.500 |
High resolution limit [Å] | 2.200 | 2.400 |
Rmerge | 0.131 | 0.211 |
Rmeas | 0.150 | 0.295 |
Rpim | 0.071 | 0.206 |
Number of reflections | 5846 | 263 |
<I/σ(I)> | 4.6 | 1.7 |
Completeness [%] | 70.0 | 46.2 |
Redundancy | 2.6 | 1.2 |
CC(1/2) | 0.987 | 0.933 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6.5 | 298 | The crystals were grown by sitting drop vapor diffusion in Cryschem plates using 0.6 ml reservoirs of 16% to 18% 2-methyl-2,4-pentanediol (MPD) containing o.1 M sodium acetate and 0.25% octyl-beta-s-1-thioglucopyanoside. The drops were equal volumes, generally 6 ul each, of the reservoir and an 8 mg/ml solution of protein dissolved in .02 M ammonium bicarbonate. |