6NAE
Crystal Structure of Ebola zaire GP protein with bound ARN0074898
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-10-05 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.97872 |
Spacegroup name | H 3 2 |
Unit cell lengths | 113.250, 113.250, 307.210 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 49.554 - 2.750 |
R-factor | 0.1974 |
Rwork | 0.193 |
R-free | 0.23980 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6f5u |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.554 | 49.554 | 2.820 |
High resolution limit [Å] | 2.750 | 12.300 | 2.750 |
Rmerge | 0.065 | 0.025 | 0.528 |
Rmeas | 0.070 | 0.028 | 0.567 |
Total number of observations | 149327 | ||
Number of reflections | 20154 | 260 | 1491 |
<I/σ(I)> | 23.09 | 53.46 | 4.15 |
Completeness [%] | 100.0 | 96.7 | 100 |
Redundancy | 7.409 | 5.846 | 7.537 |
CC(1/2) | 0.999 | 0.999 | 0.947 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.1 | 290 | EbzaA.19907.a.HE11.PD38326 at 6.01 mg /ml and mixed 1:1 with an opt screen based on JCSG+(b8): 11 % (w/v) PEG-8000, 0.1 M Tris base/ HCl, pH = 7.1, 200 mM MgCl2, Crystals were soaked with 1 mM ARN0074898 for 4 hours and cryoprotected with 20% glyerol. Tray: 303411b4, puck: jvo4-3 |