6N2G
Crystal structure of Caenorhabditis elegans NAP1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 14-BM-C |
Synchrotron site | APS |
Beamline | 14-BM-C |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-02-10 |
Detector | NOIR-1 |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 125.597, 154.868, 92.551 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.796 - 3.003 |
R-factor | 0.2416 |
Rwork | 0.241 |
R-free | 0.25530 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.004 |
RMSD bond angle | 0.721 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.21) |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 154.868 | 19.796 | 3.170 |
High resolution limit [Å] | 3.003 | 9.500 | 3.003 |
Rmerge | 0.028 | 0.666 | |
Rmeas | 0.125 | 0.030 | 0.720 |
Rpim | 0.047 | 0.012 | 0.270 |
Number of reflections | 61500 | 1136 | 5141 |
<I/σ(I)> | 13.3 | 16.3 | 1.2 |
Completeness [%] | 89.4 | 88.9 | 97.4 |
Redundancy | 6.9 | 6.6 | 6.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 298 | 0.1 M Sodium HEPES pH 7.5 30% PEG 400 |