6N1N
Crystal structure of class D beta-lactamase from Sebaldella termitidis ATCC 33386
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-BM |
Synchrotron site | APS |
Beamline | 19-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-10-19 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.97933 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 63.510, 97.546, 40.328 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 27.916 - 1.601 |
R-factor | 0.1619 |
Rwork | 0.160 |
R-free | 0.20100 |
Structure solution method | SAD |
RMSD bond length | 0.009 |
RMSD bond angle | 1.061 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | HKL-3000 |
Refinement software | PHENIX ((1.14rc1_3161: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.630 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.135 | 1.338 |
Number of reflections | 32985 | 1543 |
<I/σ(I)> | 17.5 | 1.51 |
Completeness [%] | 97.6 | 93.6 |
Redundancy | 9.5 | 7.8 |
CC(1/2) | 0.998 | 0.603 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 289 | 0. 2 M Li2SO4, ).1 M Tris/HCl, pH 8.5, 25% PEG3350, cryo 10% glycerol |