6N1F
Crystal structure of Oxidoreductase, 2OG-Fe(II) oxygenase family, from Burkholderia pseudomallei
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 21-ID-G |
| Synchrotron site | APS |
| Beamline | 21-ID-G |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2018-11-01 |
| Detector | RAYONIX MX-300 |
| Wavelength(s) | 0.97856 |
| Spacegroup name | P 1 |
| Unit cell lengths | 47.030, 54.990, 112.100 |
| Unit cell angles | 77.66, 87.03, 64.73 |
Refinement procedure
| Resolution | 27.351 - 2.050 |
| R-factor | 0.209 |
| Rwork | 0.208 |
| R-free | 0.24160 |
| Structure solution method | SAD |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.859 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX ((dev_3304)) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 27.351 | 27.351 | 2.100 |
| High resolution limit [Å] | 2.050 | 9.170 | 2.050 |
| Rmerge | 0.070 | 0.051 | 0.345 |
| Rmeas | 0.081 | 0.060 | 0.413 |
| Total number of observations | 228439 | ||
| Number of reflections | 59902 | 594 | 4015 |
| <I/σ(I)> | 11.64 | 22.66 | 3.17 |
| Completeness [%] | 96.3 | 86.3 | 87.5 |
| Redundancy | 3.814 | 3.419 | 3.339 |
| CC(1/2) | 0.997 | 0.996 | 0.912 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 290 | Hampton Research PACT screen F12: 200mM sodium malonate dibasic, 20% PEG 3350, 100mM BisTris propane/HCl pH 6.5: BupsA.17629.a.A1.PD38303 at 10.9mg/ml: cryo: 20% EG: tray 299888F12: puck WTM5-3 |






