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6MVU

Structure of a bacterial ALDH16 active site mutant C295A complexed with p-nitrophenylacetate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyPIXEL
Collection date2017-11-02
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.9791
Spacegroup nameP 21 21 21
Unit cell lengths79.383, 119.623, 158.670
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution95.519 - 1.488
R-factor0.1928
Rwork0.192
R-free0.21580
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)homology model built with Swiss-Model using 5kf6 as the template
Data reduction softwareXDS
Data scaling softwareAimless (0.5.23)
Phasing softwarePHASER
Refinement softwarePHENIX
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]119.6201.510
High resolution limit [Å]1.4881.488
Rmerge0.1331.799
Rmeas0.1441.952
Rpim0.0550.748
Number of reflections47041011001
<I/σ(I)>8.8
Completeness [%]98.890.8
Redundancy6.76.5
CC(1/2)0.9980.440
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.5293Protein was concentrated to 6 mg/ml in a storage buffer consisting of 20 mM Tris-HCl at pH 8.0, 100 mM NaCl, 2.5% glycerol and 0.5 mM TCEP. The crystallization reservoir solution contained 20% (w/v) polyethylene glycol (PEG) 3350, 200 mM ammonium sulfate and 100 mM Bis-Tris at pH 5.5.

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PDB entries from 2024-05-15

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