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6MVT

Structure of a bacterial ALDH16 complexed with NADH

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 4.2.2
Synchrotron siteALS
Beamline4.2.2
Temperature [K]100
Detector technologyCMOS
Collection date2017-05-24
DetectorRDI CMOS_8M
Wavelength(s)1.00
Spacegroup nameP 21 21 2
Unit cell lengths79.719, 159.109, 62.664
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.266 - 2.300
R-factor0.1742
Rwork0.172
R-free0.22350
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)homology model built with Swiss-Model using 5kf6 as the template
Data reduction softwareXDS
Data scaling softwareAimless (0.5.32)
Phasing softwarePHASER
Refinement softwarePHENIX
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]62.6602.380
High resolution limit [Å]2.3002.300
Rmerge0.1280.459
Rmeas0.1460.525
Rpim0.0700.252
Number of reflections669293487
<I/σ(I)>9.2
Completeness [%]99.499.9
Redundancy4.24.2
CC(1/2)0.9920.848
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.5293Protein was concentrated to 6 mg/ml in a storage buffer consisting of 20 mM Tris-HCl at pH 8.0, 100 mM NaCl, 2.5% glycerol and 0.5 mM TCEP. The crystallization reservoir solution contained 20% (w/v) polyethylene glycol (PEG) 3350, 200 mM ammonium sulfate and 100 mM Bis-Tris at pH 5.5.

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PDB entries from 2024-05-15

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