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6MVR

Structure of a bacterial ALDH16

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 4.2.2
Synchrotron siteALS
Beamline4.2.2
Temperature [K]100
Detector technologyCMOS
Collection date2017-05-24
DetectorRDI CMOS_8M
Wavelength(s)1.00
Spacegroup nameP 21 21 2
Unit cell lengths79.593, 159.388, 62.677
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.266 - 1.950
R-factor0.1558
Rwork0.154
R-free0.19380
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)HOMOLOGY MODEL BUILT WITH SWISS-MODEL USING 5KF6 AS THE TEMPLATE
Data reduction softwareXDS
Data scaling softwareAimless (0.5.32)
Phasing softwarePHASER (homology model built with Swiss-Model using 5kf6 as the template)
Refinement softwarePHENIX
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]62.6802.000
High resolution limit [Å]1.9501.950
Rmerge0.0680.281
Rmeas0.0730.316
Rpim0.0280.140
Number of reflections1073583249
<I/σ(I)>21.1
Completeness [%]97.180
Redundancy6.54.7
CC(1/2)0.9980.941
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.5293Protein was concentrated to 6 mg/ml in a storage buffer consisting of 20 mM Tris-HCl at pH 8.0, 100 mM NaCl, 2.5% glycerol and 0.5 mM TCEP. The crystallization reservoir solution contained 20% (w/v) polyethylene glycol (PEG) 3350, 200 mM ammonium sulfate and 100 mM Bis-Tris at pH 5.5.

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PDB entries from 2024-05-15

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