6MQS
Vaccine-elicited NHP FP-targeting HIV neutralizing antibody A12V163-a.01 in complex with HIV fusion peptide (residue 512-519)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-02-19 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 98.781, 98.781, 261.009 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.682 - 2.997 |
R-factor | 0.234 |
Rwork | 0.233 |
R-free | 0.24680 |
Structure solution method | MOLECULAR REPLACEMENT |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.050 |
High resolution limit [Å] | 3.000 | 8.130 | 3.000 |
Rmerge | 0.106 | 0.053 | 0.840 |
Rmeas | 0.110 | 0.055 | 0.877 |
Rpim | 0.030 | 0.016 | 0.244 |
Total number of observations | 327292 | ||
Number of reflections | 26605 | 1533 | 1210 |
<I/σ(I)> | 6.4 | ||
Completeness [%] | 98.9 | 99.7 | 94 |
Redundancy | 12.3 | 12.1 | 10.9 |
CC(1/2) | 0.999 | 0.931 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.17 M NH4CH3CO2, 0.085 M acetate pH 4.6, 25.5% w/v PEG 4000, and 15% glycerol |