6MP3
Binary structure of DNA polymerase eta in complex with templating hypoxanthine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-23 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.0 |
Spacegroup name | P 61 |
Unit cell lengths | 98.650, 98.650, 81.242 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 42.717 - 1.907 |
R-factor | 0.1703 |
Rwork | 0.168 |
R-free | 0.20900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4o3n |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.940 |
High resolution limit [Å] | 1.910 | 5.180 | 1.910 |
Rmerge | 0.119 | 0.052 | 0.996 |
Rmeas | 0.126 | 0.055 | 1.053 |
Rpim | 0.040 | 0.017 | 0.341 |
Total number of observations | 350721 | ||
Number of reflections | 35061 | 1816 | 1736 |
<I/σ(I)> | 4.3 | ||
Completeness [%] | 100.0 | 100 | 99.9 |
Redundancy | 10 | 10.2 | 9.4 |
CC(1/2) | 0.998 | 0.728 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 291.15 | 100mM MES 5.5, PEG 2K MME, 10mM MgSo4 |