6MLJ
Crystal structure of the periplasmic Lysine-, Arginine-, Ornithine-binding protein (LAO) S70A mutant from Salmonella typhimurium complexed with arginine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-05-02 |
Detector | DECTRIS PILATUS 200K |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 58.087, 37.241, 102.036 |
Unit cell angles | 90.00, 90.01, 90.00 |
Refinement procedure
Resolution | 38.340 - 1.600 |
R-factor | 0.1923 |
Rwork | 0.192 |
R-free | 0.22360 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1laf |
RMSD bond length | 0.012 |
RMSD bond angle | 1.909 |
Data reduction software | HKL-3000 (R) |
Data scaling software | HKL-3000 (R) |
Phasing software | PHENIX |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.340 | 1.660 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.101 | 0.259 |
Number of reflections | 58580 | 5747 |
<I/σ(I)> | 18.3 | 6.8 |
Completeness [%] | 99.1 | 99 |
Redundancy | 4.6 | 2.8 |
CC(1/2) | 0.991 | 0.939 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 291.15 | 0.2 M Sodium acetate trihydrate, 0.1 M Sodium cacodylate trihydrate pH 6.5, 30% w/v Polyethylene glycol 8,000 |