6MKW
Crystal structure of the periplasmic Lysine-, Arginine-, Ornithine-binding protein (LAO) D11A mutant from Salmonella typhimurium complexed with histidine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-04-10 |
Detector | DECTRIS PILATUS 200K |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 36.897, 59.016, 115.544 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.148 - 2.320 |
R-factor | 0.1781 |
Rwork | 0.173 |
R-free | 0.22840 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1lag |
RMSD bond length | 0.010 |
RMSD bond angle | 1.002 |
Data reduction software | HKL-3000 (R) |
Data scaling software | HKL-3000 (R) |
Phasing software | PHENIX ((1.14_3260)) |
Refinement software | PHENIX ((1.14_3260:)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.360 |
High resolution limit [Å] | 2.320 | 2.320 |
Rmerge | 0.098 | 0.327 |
Number of reflections | 11213 | 1055 |
<I/σ(I)> | 22.1 | 4.3 |
Completeness [%] | 97.9 | 93.1 |
Redundancy | 6.3 | 3.3 |
CC(1/2) | 0.993 | 0.885 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 291.15 | 0.2 M Sodium acetate trihydrate 0.1 M Sodium cacodylate trihydrate 30% w/v Polyethylene glycol 8,000 |