6MJP
LptB(E163Q)FGC from Vibrio cholerae
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-14 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9792 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 167.354, 80.729, 202.992 |
Unit cell angles | 90.00, 112.18, 90.00 |
Refinement procedure
Resolution | 49.265 - 2.850 |
R-factor | 0.2434 |
Rwork | 0.242 |
R-free | 0.29170 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6mit |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.1) |
Phasing software | PHASER (2.8.1) |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.270 | 2.930 |
High resolution limit [Å] | 2.850 | 2.850 |
Rmerge | 0.183 | 2.821 |
Rmeas | 0.199 | 3.059 |
Rpim | 0.078 | 1.172 |
Total number of observations | 378386 | 30433 |
Number of reflections | 58702 | 4558 |
<I/σ(I)> | 7.4 | 0.8 |
Completeness [%] | 99.6 | 100 |
Redundancy | 6.4 | 6.7 |
CC(1/2) | 0.995 | 0.305 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | 41% PEG400, 100mM Tris pH =8.5, 200mM CaCl2 |