Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6MFV

Crystal structure of the Signal Transduction ATPase with Numerous Domains (STAND) protein with a tetratricopeptide repeat sensor PH0952 from Pyrococcus horikoshii

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSOLEIL BEAMLINE PROXIMA 2
Synchrotron siteSOLEIL
BeamlinePROXIMA 2
Temperature [K]100
Detector technologyCCD
Collection date2013-03-21
DetectorADSC QUANTUM 315r
Wavelength(s)0.9801
Spacegroup nameP 65
Unit cell lengths96.126, 96.126, 584.259
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution48.688 - 3.400
R-factor0.2263
Rwork0.224
R-free0.27160
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Obtained by SAD phasing
RMSD bond length0.002
RMSD bond angle0.482
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.6903.540
High resolution limit [Å]3.4003.400
Rmerge0.0930.791
Rpim0.0420.355
Number of reflections4180927458
<I/σ(I)>8.9
Completeness [%]100.0
Redundancy5.8
CC(1/2)0.9990.884
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29110% (v/v) 2-propanol, 0.1 M imidazole pH 8

246031

PDB entries from 2025-12-10

PDB statisticsPDBj update infoContact PDBjnumon