6MFQ
Crystal structure of a PMS2 variant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-04-26 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97946 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 74.989, 74.962, 134.399 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.459 - 2.600 |
R-factor | 0.2314 |
Rwork | 0.221 |
R-free | 0.23160 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1h7s |
RMSD bond length | 0.002 |
RMSD bond angle | 0.496 |
Data reduction software | SAINT (V8.37A) |
Data scaling software | SADABS |
Phasing software | PHASER (2.7.16) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.460 | 2.693 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.182 | 1.567 |
Rmeas | 0.189 | 1.620 |
Rpim | 0.049 | 0.416 |
Number of reflections | 23960 | 2361 |
<I/σ(I)> | 12.8 | 1.6 |
Completeness [%] | 100.0 | 100 |
Redundancy | 14.8 | 15.1 |
CC(1/2) | 0.998 | 0.584 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5 | 289.15 | Crystals were obtained in conditions containing 4% tacsimate pH 5 (v/v) and 25% PEG 3350 (w/v). The concentrated PMS2 G207E protein (7 mg/mL) was combined with 0.1ul of an additive (0.1 M calcium chloride dehydrate) prior to the addition of crystallization reagent in a 1:1 ratio. |