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6MEA

Crystal structure of a Tylonycteris bat coronavirus HKU4 macrodomain in complex with adenosine diphosphate ribose (ADP-ribose)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyCCD
Collection date2017-07-02
DetectorRAYONIX MX300-HS
Wavelength(s)1.0000
Spacegroup nameP 1
Unit cell lengths33.614, 41.642, 59.783
Unit cell angles73.16, 88.29, 88.25
Refinement procedure
Resolution33.590 - 1.350
R-factor0.1431
Rwork0.142
R-free0.16210
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5dus
RMSD bond length0.007
RMSD bond angle1.396
Data reduction softwareXDS (Version Nov. 1, 2016)
Data scaling softwareAimless (0.5.32)
Phasing softwarePHASER (2.8.2)
Refinement softwareREFMAC (5.8.0158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]39.8501.370
High resolution limit [Å]1.3501.350
Rmerge0.1210.657
Rmeas0.1420.783
Rpim0.0740.421
Number of reflections633122865
<I/σ(I)>9.83
Completeness [%]92.786.2
Redundancy3.73.4
CC(1/2)0.9910.662
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29520-25% PEG3350, 0.1 M HEPES, pH 7.0-7.5, protein:ligand molar ratio 1:10

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