6M9L
Structure-based Design, Synthesis, and Biological Evaluation of Imidazo[4,5-b]pyridine-2-one based p38 MAP Kinase Inhibitors by scaffold hopping - compound 10
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.3 |
Synchrotron site | ALS |
Beamline | 5.0.3 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-01-25 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.976 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 68.674, 71.046, 74.562 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.380 - 2.450 |
R-factor | 0.2162 |
Rwork | 0.213 |
R-free | 0.26970 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.633 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.380 | 2.540 |
High resolution limit [Å] | 2.450 | 2.450 |
Rmerge | 0.160 | 0.517 |
Rpim | 0.073 | 0.270 |
Number of reflections | 13411 | 1135 |
<I/σ(I)> | 13 | 2.76 |
Completeness [%] | 96.8 | 83.83 |
Redundancy | 5.6 | 4 |
CC(1/2) | 0.989 | 0.792 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.4 | 277.2 | 24.% PEG MME 5000, 0.1M MES_Na |