6M8V
Crystal structure of UbiX-like FMN prenyltransferase MJ0101 from Methanocaldococcus jannaschii, FMN complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-02-16 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.97872 |
Spacegroup name | F 2 3 |
Unit cell lengths | 133.440, 133.440, 133.440 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 27.238 - 2.221 |
R-factor | 0.1581 |
Rwork | 0.155 |
R-free | 0.20670 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2ejb |
RMSD bond length | 0.004 |
RMSD bond angle | 0.648 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((dev_3092: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.180 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.087 | 1.382 |
Rpim | 0.020 | 0.296 |
Number of reflections | 11575 | 1130 |
<I/σ(I)> | 41.48 | 2.1 |
Completeness [%] | 100.0 | 100 |
Redundancy | 20.7 | 22.7 |
CC(1/2) | 0.774 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 298 | 0.1 M HEPES pH 7.5, 0.2 M calcium chloride, 28% (w/v) PEG400 Cryoprotectant 5% glycerol, paratone |