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6M5E

Human serum albumin with cyclic peptide dalbavancin

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL32XU
Synchrotron siteSPring-8
BeamlineBL32XU
Temperature [K]100
Detector technologyPIXEL
Collection date2019-07-30
DetectorDECTRIS EIGER X 9M
Wavelength(s)1.0
Spacegroup nameC 1 2 1
Unit cell lengths197.050, 125.680, 125.740
Unit cell angles90.00, 90.32, 90.00
Refinement procedure
Resolution45.780 - 2.800
R-factor0.1824
Rwork0.180
R-free0.22760
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1ao6
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.17)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]45.78045.7802.970
High resolution limit [Å]2.8008.4002.800
Rmerge0.4680.1004.561
Rmeas0.4790.1024.670
Total number of observations1661847
Number of reflections75497286612153
<I/σ(I)>9.2739.161.02
Completeness [%]100.099.3100
Redundancy22.01223.46621.464
CC(1/2)0.9930.9980.504
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2770.1 M Sodium citrate tribasic dihydrate pH 5.0 30 % v/v Jeffamine ED-2001 pH 7.0

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PDB entries from 2024-05-15

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