6M48
Crystal structure of pilus adhesin, SpaC from Lactobacillus rhamnosus GG - P21212 form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM14 |
Synchrotron site | ESRF |
Beamline | BM14 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-04-27 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.95372 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 116.181, 128.128, 136.358 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.260 - 2.500 |
R-factor | 0.19393 |
Rwork | 0.192 |
R-free | 0.23525 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6m3y |
RMSD bond length | 0.011 |
RMSD bond angle | 1.678 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.690 | 2.560 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.068 | 0.758 |
Rpim | 0.057 | 0.631 |
Number of reflections | 70856 | 4503 |
<I/σ(I)> | 14.4 | 1.9 |
Completeness [%] | 99.8 | |
Redundancy | 4.4 | |
CC(1/2) | 0.999 | 0.718 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6.5 | 295 | 0.25M Sodium sulphate, 0.1M BIS-Tris propane pH 6.5, 15% PEG 3350 |