6LYN
CD146 D4-D5/AA98 Fab
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-05-29 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97915 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 84.203, 88.387, 94.644 |
Unit cell angles | 90.00, 89.93, 90.00 |
Refinement procedure
Resolution | 29.712 - 2.776 |
R-factor | 0.2189 |
Rwork | 0.217 |
R-free | 0.26150 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1yec |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 2.900 |
High resolution limit [Å] | 2.776 | 6.020 | 2.800 |
Rmerge | 0.094 | 0.040 | |
Rmeas | 0.104 | 0.044 | |
Rpim | 0.045 | 0.017 | 0.453 |
Number of reflections | 30880 | 3024 | 3122 |
<I/σ(I)> | 8 | ||
Completeness [%] | 88.7 | 84.6 | 89.9 |
Redundancy | 5.5 | 5.9 | 5.3 |
CC(1/2) | 0.999 | 0.700 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291 | 0.1M Hepes, pH 7.5, 8~15% w/v Polyethylene glycol 2000 MME |