6LW0
Crystal structure of TLR7/Cpd-6 (DSR-139293) complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NE3A |
Synchrotron site | Photon Factory |
Beamline | AR-NE3A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-05-14 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 98.152, 139.401, 148.980 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.291 - 2.600 |
R-factor | 0.2081 |
Rwork | 0.205 |
R-free | 0.25960 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5gmh |
RMSD bond length | 0.010 |
RMSD bond angle | 1.387 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.780 | 2.660 |
High resolution limit [Å] | 2.600 | 2.600 |
Number of reflections | 63582 | 4430 |
<I/σ(I)> | 13.8 | |
Completeness [%] | 100.0 | |
Redundancy | 6.7 | |
CC(1/2) | 0.998 | 0.612 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2M ammonium sulfate, 0.1M tri-sodium citrate pH 5.6, 15% (w/v) PEG 4000 |