6LT9
The crystal structure of diamondback moth ryanodine receptor SPRY1 domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 193.15 |
Detector technology | PIXEL |
Collection date | 2019-06-13 |
Detector | DECTRIS PILATUS3 R CdTe 300K |
Wavelength(s) | 0.9792 |
Spacegroup name | P 43 |
Unit cell lengths | 64.893, 64.893, 95.767 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 23.942 - 1.801 |
R-factor | 0.1883 |
Rwork | 0.186 |
R-free | 0.21650 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5c33 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.14_3247) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.830 |
High resolution limit [Å] | 1.800 | 4.880 | 1.800 |
Rmerge | 0.102 | 0.052 | 0.365 |
Rmeas | 0.112 | 0.057 | 0.462 |
Rpim | 0.044 | 0.022 | 0.277 |
Total number of observations | 212691 | ||
Number of reflections | 36452 | 1897 | 1655 |
<I/σ(I)> | 4.7 | ||
Completeness [%] | 99.3 | 100 | 90.6 |
Redundancy | 5.8 | 6.5 | 2.3 |
CC(1/2) | 0.998 | 0.726 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277.15 | 2M Ammonium, 0.2M sodium chloride, 0.1M sodium cacodylate, ph 6.5. |