6LSQ
Crystal structure of Echistatin, an RGD-containing short disintegrin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE TPS 05A |
Synchrotron site | NSRRC |
Beamline | TPS 05A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-12-01 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 0.99984 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 33.906, 33.906, 121.172 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 30.000 - 1.800 |
R-factor | 0.21226 |
Rwork | 0.212 |
R-free | 0.25500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4rqg |
RMSD bond length | 0.009 |
RMSD bond angle | 1.461 |
Data reduction software | XDS (20190315) |
Data scaling software | XDS (20190315) |
Phasing software | XDS (20190315) |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.910 |
High resolution limit [Å] | 1.800 | 1.800 |
Number of reflections | 7695 | 2099 |
<I/σ(I)> | 7.88 | 2.96 |
Completeness [%] | 92.5 | |
Redundancy | 4.9 | |
CC(1/2) | 0.991 | 0.951 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2 M Bicine pH9.0 2.55M (NH4)2SO4 |