6LQK
Crystal structure of honeybee RyR NTD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 193.15 |
Detector technology | PIXEL |
Collection date | 2019-01-13 |
Detector | DECTRIS PILATUS3 R CdTe 300K |
Wavelength(s) | 0.9792 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 36.054, 75.363, 143.878 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.682 - 2.499 |
R-factor | 0.229 |
Rwork | 0.223 |
R-free | 0.28780 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5y9v |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.14_3247) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.540 |
High resolution limit [Å] | 2.499 | 6.780 | 2.500 |
Rmerge | 0.122 | 0.077 | 0.699 |
Rmeas | 0.134 | 0.085 | 0.773 |
Rpim | 0.054 | 0.035 | 0.322 |
Number of reflections | 14282 | 819 | 710 |
<I/σ(I)> | 4.8 | ||
Completeness [%] | 99.8 | 99.4 | 98.7 |
Redundancy | 6.1 | 5.5 | 5.4 |
CC(1/2) | 0.997 | 0.841 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298.15 | 0.2 M magnesium chloride hexahydrate, 34%-40% PEG 4000, 0.1 M Tris, pH 8.5-9.4 |