6LKC
Crystal structure of PfaD from Shewanella piezotolerans in complex with FMN
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-03-21 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97918 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 70.467, 62.568, 127.507 |
Unit cell angles | 90.00, 105.61, 90.00 |
Refinement procedure
Resolution | 53.609 - 1.998 |
R-factor | 0.1812 |
Rwork | 0.179 |
R-free | 0.21860 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4yx6 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 122.810 | 2.110 |
High resolution limit [Å] | 1.998 | 1.998 |
Rmerge | 0.066 | |
Number of reflections | 72459 | 10425 |
<I/σ(I)> | 18.7 | |
Completeness [%] | 99.7 | 99 |
Redundancy | 6.8 | |
CC(1/2) | 0.903 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 289.15 | 20% (w/v) polyethylene glycol 3350, 0.2M ammonium citrate tribasic, pH 7.0, 2% (v/v) dimethyl sulfoxide |