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6LKC

Crystal structure of PfaD from Shewanella piezotolerans in complex with FMN

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U1
Synchrotron siteSSRF
BeamlineBL17U1
Temperature [K]100
Detector technologyCCD
Collection date2019-03-21
DetectorADSC QUANTUM 315r
Wavelength(s)0.97918
Spacegroup nameP 1 21 1
Unit cell lengths70.467, 62.568, 127.507
Unit cell angles90.00, 105.61, 90.00
Refinement procedure
Resolution53.609 - 1.998
R-factor0.1812
Rwork0.179
R-free0.21860
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4yx6
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]122.8102.110
High resolution limit [Å]1.9981.998
Rmerge0.066
Number of reflections7245910425
<I/σ(I)>18.7
Completeness [%]99.799
Redundancy6.8
CC(1/2)0.903
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP289.1520% (w/v) polyethylene glycol 3350, 0.2M ammonium citrate tribasic, pH 7.0, 2% (v/v) dimethyl sulfoxide

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