6LH7
Crystal Structure of Vibrio cholerae Methionine Aminopeptidase with Partially Occupied Metals
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ELETTRA BEAMLINE 11.2C |
Synchrotron site | ELETTRA |
Beamline | 11.2C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-07-28 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9536 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 49.702, 50.293, 131.684 |
Unit cell angles | 90.00, 97.24, 90.00 |
Refinement procedure
Resolution | 48.226 - 1.473 |
Rwork | 0.152 |
R-free | 0.17650 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6k26 |
RMSD bond length | 0.014 |
RMSD bond angle | 1.883 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.3) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0257) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.310 | 49.310 | 1.500 |
High resolution limit [Å] | 1.470 | 8.070 | 1.470 |
Rmerge | 0.062 | 0.029 | 0.676 |
Rmeas | 0.067 | 0.032 | 0.739 |
Rpim | 0.026 | 0.013 | 0.294 |
Total number of observations | 684923 | 4032 | 31658 |
Number of reflections | 108944 | 716 | 5255 |
<I/σ(I)> | 17.6 | 46.6 | 2.7 |
Completeness [%] | 99.7 | 98.7 | 97.7 |
Redundancy | 6.3 | 5.6 | 6 |
CC(1/2) | 0.999 | 0.999 | 0.841 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.3 | 298 | 0.1 M Hepes pH-7.3 , 10% PEG 3350, 5% Glycerol |