Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6LER

169 bp nucleosome harboring non-identical cohesive DNA termini.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06DA
Synchrotron siteSLS
BeamlineX06DA
Temperature [K]98.15
Detector technologyPIXEL
Collection date2019-08-26
DetectorDECTRIS PILATUS 2M-F
Wavelength(s)1
Spacegroup nameP 1
Unit cell lengths107.338, 116.545, 117.900
Unit cell angles61.50, 82.77, 64.23
Refinement procedure
Resolution48.120 - 3.000
R-factor0.2094
Rwork0.208
R-free0.26090
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3ut9
RMSD bond length0.004
RMSD bond angle1.152
Data reduction softwareMOSFLM
Data scaling softwareAimless
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0232)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.1203.050
High resolution limit [Å]3.0003.000
Rmerge0.0560.883
Rmeas0.079
Rpim0.0560.883
Number of reflections887544306
<I/σ(I)>121
Completeness [%]98.693.7
Redundancy3.53.1
CC(1/2)0.9970.539
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.5291.15Calcium chloride, potassium chloride, sodium acetate

237423

PDB entries from 2025-06-11

PDB statisticsPDBj update infoContact PDBjnumon