6LAD
Crystal structure of Amuc_1100 from Akkermansia muciniphila
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL17U |
| Synchrotron site | SSRF |
| Beamline | BL17U |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2018-12-21 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.9792 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 116.657, 123.560, 131.072 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 48.933 - 2.700 |
| R-factor | 0.215 |
| Rwork | 0.213 |
| R-free | 0.24900 |
| Structure solution method | SAD |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | SOLVE |
| Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 2.800 |
| High resolution limit [Å] | 2.700 | 5.810 | 2.700 |
| Rmerge | 0.063 | 0.032 | 0.856 |
| Rmeas | 0.067 | 0.034 | 0.901 |
| Rpim | 0.021 | 0.011 | 0.278 |
| Total number of observations | 523303 | ||
| Number of reflections | 51987 | 5446 | 5157 |
| <I/σ(I)> | 11.7 | ||
| Completeness [%] | 98.6 | 98.1 | 99.6 |
| Redundancy | 10.1 | 9.7 | 10.2 |
| CC(1/2) | 0.999 | 0.862 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8 | 289 | 0.1 M Tris-HCl, pH 8.0, 40% PEG 1000 |






