6L9I
Crystal Structure of Lactobacillus farciminis Oxalate Decarboxylase Formate Complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-12-01 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.987 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 92.957, 122.842, 115.223 |
Unit cell angles | 90.00, 92.47, 90.00 |
Refinement procedure
Resolution | 48.000 - 2.790 |
R-factor | 0.1986 |
Rwork | 0.197 |
R-free | 0.22940 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1uw8 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.109 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.17_3644) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.920 |
High resolution limit [Å] | 2.790 | 2.790 |
Rmeas | 0.751 | |
Number of reflections | 62238 | 5989 |
<I/σ(I)> | 8.25 | 2.857 |
Completeness [%] | 98.8 | |
Redundancy | 6.3 | |
CC(1/2) | 0.952 | 0.810 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 298 | 18% PEG 3350, 0.2M NH4Cl, 0.2M Sodium dihydrogen phosphate, 0.2M Bis-Tris pH5.5 |