6L06
Crystal structure of Escherichia coli phosphatidylserine decarboxylase (apo-form)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SPRING-8 BEAMLINE BL41XU |
| Synchrotron site | SPring-8 |
| Beamline | BL41XU |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2018-12-09 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 21 21 2 |
| Unit cell lengths | 156.882, 172.012, 80.588 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 47.060 - 2.600 |
| R-factor | 0.2332 |
| Rwork | 0.231 |
| R-free | 0.27570 |
| Structure solution method | SAD |
| Data scaling software | XSCALE |
| Phasing software | AutoSol |
| Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 2.760 |
| High resolution limit [Å] | 2.600 | 2.600 |
| Rmeas | 0.077 | 1.009 |
| Number of reflections | 67495 | 20374 |
| <I/σ(I)> | 11.35 | 1.03 |
| Completeness [%] | 99.5 | 97.6 |
| Redundancy | 3.58 | 3.6 |
| CC(1/2) | 0.998 | 0.724 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | Tacsimate |






