6KZJ
Crystal structure of Ankyrin B/NdeL1 complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-11-21 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97852 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 40.446, 44.690, 77.880 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 10.000 - 1.500 |
R-factor | 0.1628 |
Rwork | 0.161 |
R-free | 0.21080 |
Structure solution method | AB INITIO PHASING |
RMSD bond length | 0.012 |
RMSD bond angle | 1.633 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | Arcimboldo |
Refinement software | REFMAC (5.8.0253) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.530 |
High resolution limit [Å] | 1.500 | 4.070 | 1.500 |
Rmerge | 0.059 | 0.042 | 0.435 |
Rmeas | 0.062 | 0.044 | 0.456 |
Rpim | 0.019 | 0.014 | 0.136 |
Total number of observations | 238129 | ||
Number of reflections | 22182 | 1293 | 1135 |
<I/σ(I)> | 5.7 | ||
Completeness [%] | 95.0 | 99.8 | 99.9 |
Redundancy | 10.7 | 10.1 | 11 |
CC(1/2) | 0.998 | 0.966 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 5.6 | 289 | 1.9M ammonium sulfate, 0.16M potassium sodium tartrate tetrahydrate, 0.1M sodium citrate tribasic dehydrate pH 5.6 |