6KYA
Crystal structure of human TLR8 in complex TH1027
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
| Synchrotron site | Photon Factory |
| Beamline | AR-NW12A |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2017-11-19 |
| Detector | ADSC QUANTUM 270 |
| Wavelength(s) | 1.0000 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 142.745, 96.871, 140.864 |
| Unit cell angles | 90.00, 107.65, 90.00 |
Refinement procedure
| Resolution | 48.440 - 2.890 |
| R-factor | 0.2298 |
| Rwork | 0.228 |
| R-free | 0.27690 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5wyx |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.626 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | MOLREP |
| Refinement software | REFMAC (5.7.0032) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 2.950 |
| High resolution limit [Å] | 2.890 | 2.900 |
| Number of reflections | 36695 | 1936 |
| <I/σ(I)> | 17.8 | |
| Completeness [%] | 94.1 | |
| Redundancy | 3 | |
| CC(1/2) | 0.859 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | 12-20% PEG4000 0.1 M Tris-HCl pH 8.5 0.2 M CaCl2 25% Ethylene glycol |
