6KW7
Crystal structure of indoleamine 2,3-dioxygenagse 1 (IDO1) in complex with compound 12
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44XU |
Synchrotron site | SPring-8 |
Beamline | BL44XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-07-14 |
Detector | MARRESEARCH |
Wavelength(s) | 0.9 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 85.466, 91.982, 129.158 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.499 - 3.020 |
R-factor | 0.2069 |
Rwork | 0.204 |
R-free | 0.25070 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5ek3 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 3.130 |
High resolution limit [Å] | 3.005 | 6.490 | 3.020 |
Rmerge | 0.068 | 0.035 | 0.497 |
Rmeas | 0.075 | 0.039 | 0.547 |
Rpim | 0.031 | 0.017 | 0.224 |
Number of reflections | 20040 | 2026 | 2005 |
<I/σ(I)> | 13.7 | ||
Completeness [%] | 96.2 | 90.8 | 98 |
Redundancy | 5.6 | 5.1 | 5.7 |
CC(1/2) | 0.999 | 0.887 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.3 | 291 | PEG3350, Ammonium Fluoride, MES |