6KRX
Crystal Structure of AtPTP1 at 1.7 angstrom
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-07-15 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.978 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 116.536, 38.970, 75.525 |
Unit cell angles | 90.00, 110.81, 90.00 |
Refinement procedure
Resolution | 37.201 - 1.700 |
Rwork | 0.151 |
R-free | 0.17430 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2hnp |
RMSD bond length | 0.006 |
RMSD bond angle | 1.279 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0253) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.760 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.043 | 0.191 |
Rmeas | 0.049 | 0.220 |
Rpim | 0.021 | 0.106 |
Number of reflections | 34099 | 2732 |
<I/σ(I)> | 30.4 | 6 |
Completeness [%] | 96.6 | 78.4 |
Redundancy | 4.8 | 4 |
CC(1/2) | 0.994 | 0.951 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293 | 0.1 M sodium citrate (pH 6.0), 25 ~ 30% polyethylene glycol (PEG) 3350, 0.2 M potassium iodide. |