6KMC
Crystal structure of a Streptococcal protein G B1 mutant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
Synchrotron site | Photon Factory |
Beamline | AR-NW12A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-11-27 |
Detector | DECTRIS PILATUS3 S 2M |
Wavelength(s) | 1.000 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 85.827, 29.439, 36.017 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.910 - 1.840 |
R-factor | 0.2007 |
Rwork | 0.197 |
R-free | 0.26690 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2zw1 |
RMSD bond length | 0.030 |
RMSD bond angle | 2.315 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC (5.5.0072) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.650 |
High resolution limit [Å] | 1.620 | 4.400 | 1.620 |
Rmerge | 0.045 | 0.040 | 0.130 |
Rmeas | 0.050 | 0.044 | 0.144 |
Rpim | 0.020 | 0.018 | 0.060 |
Total number of observations | 75501 | ||
Number of reflections | 12052 | 704 | 560 |
<I/σ(I)> | 11.1 | ||
Completeness [%] | 98.8 | 100 | 93.2 |
Redundancy | 6.3 | 5.6 | 5.5 |
CC(1/2) | 0.997 | 0.990 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 30% polyethylene glycol 8000, 100 mM imidazole hydrochloride (pH 8.0), 200 mM NaCl |