6KHN
Crystal structure of Oryza sativa TDC with PLP and SEROTONIN
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-03-30 |
Detector | DECTRIS PILATUS3 R CdTe 300K |
Wavelength(s) | 0.97846 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 156.274, 156.274, 102.392 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 47.884 - 2.293 |
R-factor | 0.1646 |
Rwork | 0.163 |
R-free | 0.20180 |
Structure solution method | MOLECULAR REPLACEMENT |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.380 |
High resolution limit [Å] | 2.293 | 4.950 | 2.300 |
Rmerge | 0.102 | 0.052 | 0.712 |
Rmeas | 0.109 | 0.055 | 0.766 |
Rpim | 0.038 | 0.018 | 0.278 |
Number of reflections | 64622 | 6709 | 6412 |
<I/σ(I)> | 12.1 | ||
Completeness [%] | 99.9 | 99.9 | 100 |
Redundancy | 8 | 8.8 | 7.5 |
CC(1/2) | 0.998 | 0.891 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 289.15 | PEG 1000, Imidazole/Hydrochloric acid, Calcium acetate |