6KH0
Design and crystal structure of protein MOFs with ferritin nanocages as linkers and nickel clusters as nodes
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-16 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9793 |
Spacegroup name | I 4 |
Unit cell lengths | 125.304, 125.304, 175.655 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.946 - 2.000 |
R-factor | 0.1069 |
Rwork | 0.101 |
R-free | 0.14110 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6a4u |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.070 |
High resolution limit [Å] | 2.000 | 4.310 | 2.000 |
Rmerge | 0.098 | 0.055 | 0.337 |
Rmeas | 0.106 | 0.060 | 0.365 |
Rpim | 0.040 | 0.023 | 0.140 |
Total number of observations | 620700 | ||
Number of reflections | 90921 | 9172 | 9072 |
<I/σ(I)> | 5.9 | ||
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 6.8 | 6.8 | 6.8 |
CC(1/2) | 0.997 | 0.906 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293.15 | 1 M NH4H2PO4, 100 mM Tris ( pH = 8.5 ) |