Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6KD1

Room temperature structure of lysozyme delivered in agarose by serial millisecond crystallography

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPAL/PLS BEAMLINE 11C
Synchrotron sitePAL/PLS
Beamline11C
Temperature [K]298.15
Detector technologyPIXEL
Collection date2019-04-03
DetectorDECTRIS PILATUS3 X 6M
Wavelength(s)0.9796
Spacegroup nameP 43 21 2
Unit cell lengths79.740, 79.740, 38.560
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution56.385 - 1.850
R-factor0.1762
Rwork0.173
R-free0.22440
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6ig6
Data reduction softwareCrystFEL
Data scaling softwareCrystFEL
Phasing softwarePHENIX
Refinement softwarePHENIX (1.13_2998)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]80.6001.910
High resolution limit [Å]1.8501.850
Number of reflections111171068
<I/σ(I)>6.33
Completeness [%]100.0100
Redundancy361.4250.4
CC(1/2)0.9950.823
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1SMALL TUBES293.5sodium acetate, PEG 8000, NaCl

238582

PDB entries from 2025-07-09

PDB statisticsPDBj update infoContact PDBjnumon